Difference between revisions of "Statistics Ontologies for representing Analysis Results Model"

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(Vocabularies for the RDF Data Cube)
(Vocabularies for the RDF Data Cube)
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=== Vocabularies for the RDF Data Cube ===
 
=== Vocabularies for the RDF Data Cube ===
The list of vocabularies is incomplete and subject to modification as our cube model matures.  This list represents the current set of standard prefixes used in the Results Model work. Additional prefixes related to the cube can be found in the [[www.example.org|Clinical Research and Development (CRND) RDF Data Cube Structure Technical]]
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The list of vocabularies is incomplete and subject to modification as our cube model matures.  This list represents the current set of standard prefixes used in the Results Model work. Additional prefixes related to the cube can be found in the [www.example.org Clinical Research and Development (CRND) RDF Data Cube Structure Technical]
  
 
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Revision as of 08:56, 14 March 2015

This page presents a summary of the ontologies identified and to a varying extend discussed in the Analysis Results Model subgroup. Please note: the links below may not be the most current, or the best for the ontologies. Please feel free to update and add, eg. more information, better examples.


Name Ontology OWL link Example
OBI http://purl.obolibrary.org/obo/obi http://purl.obofoundry.org/obo/obi.owl T-test: http://purl.obolibrary.org/obo/OBI_0000739
standard analytics https://standardanalytics.io/stats (not available?) Exahttp://purl.obolibrary.org/obo/OBI_0000739mples: https://standardanalytics.io/stats
SWEET / Statistics http://sweet.jpl.nasa.gov/ontology/ http://sweet.jpl.nasa.gov/2.3/reprMathStatistics.owl T-test: http://bioportal.bioontology.org/ontologies/SWEET?p=classes&conceptid=http%3A%2F%2Fsweet.jpl.nasa.gov%2F2.3%2FreprMathStatistics.owl%23tTest
OCRE http://rctbank.ucsf.edu/home/ocre http://ontology-of-clinical-research.googlecode.com/svn/trunk/ontology/OCRe.owl http://bioportal.bioontology.org/ontologies/OCRE?p=classes&conceptid=http%3A%2F%2Fpurl.org%2Fnet%2FOCRe%2Fstatistics.owl%23OCRE200070
OBCS https://code.google.com/p/obcs/ http://data.bioontology.org/ontologies/OBCS/submissions/5/download?apikey=4ea81d74-8960-4525-810b-fa1baab576ff T-test: http://www.ontobee.org/browser/rdf.php?o=OCRe&iri=http://purl.org/net/OCRe/statistics.owl%23OCRE200070
STATO http://stato-ontology.org/ http://data.bioontology.org/ontologies/STATO/submissions/10/download?apikey=4ea81d74-8960-4525-810b-fa1baab576ff
MAMO http://sourceforge.net/p/mamo-ontology/wiki/Home/ http://bioportal.bioontology.org/ontologies/MAMO http://data.bioontology.org/ontologies/MAMO/submissions/7/download?apikey=4ea81d74-8960-4525-810b-fa1baab576ff dependent variable: http://bioportal.bioontology.org/ontologies/MAMO/?p=classes&conceptid=http%3A%2F%2Fidentifiers.org%2Fmamo%2FMAMO_0000018
SIO http://purl.bioontology.org/ontology/SIO http://semanticscience.org/ontology/sio.owl Dependent variable: http://semanticscience.org/resource/SIO_000921

Vocabularies for the RDF Data Cube

The list of vocabularies is incomplete and subject to modification as our cube model matures. This list represents the current set of standard prefixes used in the Results Model work. Additional prefixes related to the cube can be found in the [www.example.org Clinical Research and Development (CRND) RDF Data Cube Structure Technical]

Prefix URI Use in current model
cts http://rdf.cdisc.org/ct/schema# Used when values are obtained from CDISC terminology files
mms http://rdf.cdisc.org/mms# A reference to the CDISC namespace. Used in the code value.
qb http://purl.org/linked-data/cube# Cube specification
rdfs http://www.w3.org/2000/01/rdf-schema# Labels, comments
xsd http://www.w3.org/2001/XMLSchema# Data types
dcat http://www.w3.org/ns/dcat# Distribution information
dct http://purl.org/dc/terms/ Creator, issued date, title, description..
prov http://www.w3.org/ns/prov# Provenance
owl http://www.w3.org/2002/07/owl# OWL2 Ontology Language
pav http://purl.org/pav Provenance, Authoring, Versioning