PhUSE 2015 Scriptathon Agenda

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PhUSE 2015 Annual Conference Scriptathon Agenda

Scriptathon Prep Presentation from 30Sep2015 (Dirk Spruck)

PhUSE 2015 Scriptathon SAS User Accounts


References


Task Overview

Project Target Specification Code Test Plan
Central Tendency Fig. 7.1 docx (github)

(Annotate white paper, as a reference)

SAS and R -to do-
  • Refine SAS approach to create Fig. 7.1 (sgplot/gtl rather than qc/shewhart approach)
  • Refine the R approach to create Fig. 7.1 (data-driven approach)
  • Use Fig. 7.1 scripts as starting point for scripts for remaining targets
  • Write Specifications
  • Write Tests Plan to be used to qualify scripts:
  • What tests should be included for convincing "qualification"?
  • Participants could start a list of minimum test scenarios for WPCT-F.07.01.sas and WPCT-F.07.01.R
  • Writing the test plan is helpful, implementation can follow.


Script Targets

  • Figure 7.2. Box Plot – Change in xxx Over Time
  • Figure 7.3. Box Plot – Observed Values and Change in xxx Over Time
  • Figure 7.5. Scatter Plot of Baseline Versus Endpoint Measurements for xxx
  • Figure 7.6
  • Figure 7.6A. Box Plot – Last Baseline and Last Post-baseline Measures
  • Figure 7.6B. Box Plot – Minimum Baseline and Minimum Post-baseline Measures
  • Figure 7.6C. Box Plot – Maximum Baseline and Maximum Post-baseline Measures
  • Figure 7.7
  • Figure 7.7A. Box Plot – Change From Last Baseline to Last Post-baseline Measures
  • Figure 7.7B. Box Plot – Change From Minimum Baseline to Minimum Post-baseline Measures
  • Figure 7.7C. Box Plot – Change From Maximum Baseline to Maximum Post-baseline Measures
  • Figure 7.8. Box Plot – Last/Minimum/Maximum Baseline and Last/Minimum/Maximum Post-baseline Measures and Change from Last/Minimum/Maximum Baseline to Last/Minimum/Maximum Post-baseline Measures


Task Matrix

Target Specification Code Test Plan
Figure 7.1. Box Plot – Observed Values of xxx Over Time Fig. 7.1 docx (github)

(Annotate white paper, as a reference)

SAS and R

Assigned to Simon Jennings

(Test Plan template, as a starting point)
Figure 7.2. Box Plot – Change in xxx Over Time
Figure 7.3. Box Plot – Observed Values and Change in xxx Over Time
Figure 7.5. Scatter Plot of Baseline Versus Endpoint Measurements for xxx
Figure 7.6 A/B/C. Box Plot – Last/Min/Max Baseline and Last/Min/Max Post-baseline Measures
Figure 7.7 A/B/C. Box Plot – Change From Last/Min/Max Baseline to Last/Min/Max Post-baseline Measures
Figure 7.8. Box Plot – Last/Min/Max Baseline and Last/Min/Max Post-baseline Measures and Change from Last/Min/Max Baseline to Last/Min/Max Post-baseline Measures


  • SAS
  • Better SAS box plot approach - draft a modern but straightforward ODS/SGPLOT/GTL approach to replace our current obscure SAS/QC PROC SHEWHART approach
  • Test suitability of current approach of template programs that use a custom macro library. See WPCT_F.07.01.sas to get started, suggest changes & improvements
  • Write new scripts from WPCT_F.07.01.sas to create Figure 7.1 from LAB and ECG test data. What changes does this require to the template script?
  • Enthusiastic testers can dive in and test any components in the SAS macro library that we've written to support WPCT_F.07.01.sas


  • R


PhUSEWiki Maintenance

  • Update CSS (cascading style sheet ).
  • Categorize Wikis based on list of Wikis that currently do not belong into a category (Uncategorized Pages).
  • Clean up Wikis, which are not linked (Orphan pages).
  • Clean up files, which are not linked (Unused Files).
  • Remove dummy/inactive users.
  • Create training material.
  • Search for http://code.google.com and change to GitHub page where necessary, e.g. in the Repository License agreement.